STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpd2Glycerol-3-phosphate dehydrogenase 2 (mitochondrial). (727 aa)    
Predicted Functional Partners:
tkfc
Triokinase/FMN cyclase.
    
 0.989
xylb
Xylulokinase homolog (H. influenzae).
  
 
 0.954
LOC102223376
Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.
    
 0.943
gnpat
Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
    
 0.943
gpam
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
    
 0.943
LOC102232902
Uncharacterized protein; Belongs to the FGGY kinase family.
 0.939
LOC102225159
Uncharacterized protein; Belongs to the FGGY kinase family.
 0.938
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.931
gpat3
Glycerol-3-phosphate acyltransferase 3.
  
 
 0.921
LOC102224451
Glycerol-3-phosphate acyltransferase 4.
  
 
 0.921
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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