STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102221857SUMO specific peptidase 3b. (548 aa)    
Predicted Functional Partners:
tex10
Testis expressed 10.
    
 0.777
sumo1
Small ubiquitin like modifier 1.
   
 0.776
wdr18
WD repeat domain 18.
    
 0.774
LOC102218172
Small ubiquitin-related modifier.
   
 0.722
sumo2
Small ubiquitin-related modifier.
   
 0.722
LOC102218184
Ubiquitin-like domain-containing protein.
   
 0.722
LOC102234345
Small ubiquitin-related modifier.
   
 0.722
ENSXMAP00000036223
Rad60-SLD domain-containing protein.
   
 0.717
senp6
ULP_PROTEASE domain-containing protein.
    
0.663
nol9
Nucleolar protein 9.
   
 0.659
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.