STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102223500Lecithin retinol acyltransferase b, tandem duplicate 2. (227 aa)    
Predicted Functional Partners:
LOC102226433
Uncharacterized protein.
     
 0.906
LOC102230433
Si:ch1073-13h15.3.
     
 0.906
LOC102231785
Retinoid isomerohydrolase RPE65 b.
     
 0.906
LOC102218343
Uncharacterized protein.
     
 0.906
rpe65
Retinoid isomerohydrolase RPE65 a.
     
 0.906
RETSAT
Retinol saturase.
     
 0.906
LOC102236323
Zgc:77938.
   
 
 0.904
LOC102237203
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
    
 0.904
LOC102231723
Uncharacterized protein.
   
 
 0.904
LOC102231461
PKS_ER domain-containing protein.
   
 
 0.904
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.