STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txndc15Thioredoxin domain containing 15. (346 aa)    
Predicted Functional Partners:
ttc23
Tetratricopeptide repeat domain 23.
      
 0.560
tmx1
Thioredoxin-related transmembrane protein 1.
      
 0.560
trmt9b
tRNA methyltransferase 9B.
      
 0.487
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.487
ints10
Integrator complex subunit 10.
      
 0.481
camlg
Calcium modulating ligand.
   
  
 0.447
krtcap2
Keratinocyte associated protein 2.
      
 0.416
slc25a48
Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.410
fam92a
Family with sequence similarity 92 member A1.
      
 0.408
ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
      
 0.408
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.