STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sriUncharacterized protein. (260 aa)    
Predicted Functional Partners:
cast
Uncharacterized protein.
   
 0.592
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.515
ankrd40
Ankyrin repeat domain 40.
    
 
 0.451
sec31a
SEC31 homolog A, COPII coat complex component.
    
 
 0.451
LOC102220394
SEC31 homolog B, COPII coat complex component.
    
 
 0.451
LOC102219604
Calpain 14; Belongs to the peptidase C2 family.
   
0.432
LOC102219855
Zgc:136872; Belongs to the peptidase C2 family.
   
0.432
LOC102220118
Calpain 14; Belongs to the peptidase C2 family.
   
0.432
adgb
Androglobin; Belongs to the peptidase C2 family.
   
 0.432
LOC102224358
Uncharacterized protein; Belongs to the peptidase C2 family.
   
0.432
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.