STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102231742FERM and PDZ domain containing 1b. (1704 aa)    
Predicted Functional Partners:
gpsm2
Uncharacterized protein.
    
 
 0.657
Slc25a51
Solute carrier family 25 member 51b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.487
LOC102226667
Uncharacterized protein.
    
 
 0.474
LOC102220751
Germ cell nuclear acidic peptidase.
   
  
 0.447
LOC102236356
SET domain-containing protein.
  
     0.446
gpsm1
G protein signaling modulator 1b.
    
 
 0.426
LOC111607606
Uncharacterized protein.
    
 
 0.426
flad1
Flavin adenine dinucleotide synthetase 1.
      
 0.405
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: high (88%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.