STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102236619Sema domain-containing protein; Belongs to the semaphorin family. (820 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
    
 0.594
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.594
LOC102220769
Macrophage stimulating 1 receptor a.
    
 0.594
plxna2
Plexin A2.
    
0.472
PLXNA2
Plexin A2.
    
0.472
plxna1
Sema domain-containing protein.
    
0.472
plxna4
Plexin A4.
    
0.472
ENSXMAP00000021657
IPT/TIG domain-containing protein.
    
 0.472
PLXND1
Plexin D1.
    
0.472
LOC102220729
Plexin A1a.
    
0.472
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.