STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fermt1Fermitin family member 1. (666 aa)    
Predicted Functional Partners:
LOC102231870
Filamin binding LIM protein 1.
    
 0.784
ILK
Integrin linked kinase.
   
 0.719
LOC102231522
Uncharacterized protein.
   
 0.719
trip6
Uncharacterized protein.
    
 0.680
LOC102221655
LIM domain containing preferred translocation partner in lipoma.
    
 0.680
LIMS1
LIM and senescent cell antigen-like domains 2.
   
 
 0.535
LOC102220881
LIM domain-containing protein.
   
 
 0.535
LOC102218161
Parvin, beta.
   
 
 0.530
parva
Parvin, alpha a.
   
 
 0.530
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
    
 0.521
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.