STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNN1Potassium calcium-activated channel subfamily N member 1. (914 aa)    
Predicted Functional Partners:
nxnl1
Nucleoredoxin like 1.
   
  
 0.654
LOC102224386
Uncharacterized protein.
   
  
 0.654
LOC102217077
Unc-13 homolog A.
   
  
 0.654
LOC102219713
Solute carrier family 35 member D1a.
   
  
 0.651
TNPO2
Transportin 2.
      
 0.650
TNPO2-2
Transportin 2.
      
 0.650
LOC102225971
TFIIS N-terminal domain-containing protein.
      
 0.647
mast3
Microtubule associated serine/threonine kinase 3b.
      
 0.647
LOC102227434
IlGF domain-containing protein.
      
 0.633
LOC102225896
Anti-silencing function 1Ba histone chaperone.
      
 0.631
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.