STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4A336_XIPMAProstaglandin E receptor 1b (subtype EP1). (356 aa)    
Predicted Functional Partners:
LOC102222422
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.790
LOC102238377
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.772
LOC102230612
Uncharacterized protein.
    
 0.772
LOC102230875
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.772
LOC102218075
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.772
LOC102222767
Uncharacterized protein.
    
  0.704
LOC102223026
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.704
LOC102230367
G protein subunit alpha q.
    
  0.704
ghsr
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
     
 0.672
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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