STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102222267Peptidoglycan recognition protein 6. (471 aa)    
Predicted Functional Partners:
mitd1
MIT, microtubule interacting and transport, domain containing 1.
      
 0.640
tmem121
Transmembrane protein 121Ab.
      
 0.639
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.624
ATP6
ATP synthase subunit a.
      
 0.525
rsad2
Radical S-adenosyl methionine domain containing 2.
      
 0.515
txndc9
Thioredoxin domain containing 9.
     
 0.507
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.507
ids
Sulfatase domain-containing protein.
      
 0.504
LOC102222186
Heat shock protein 4a.
   
  
 0.503
LOC102221181
Heat shock protein 4b.
   
  
 0.503
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.