STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102223271Death-associated protein kinase 2a; Belongs to the protein kinase superfamily. (486 aa)    
Predicted Functional Partners:
becn1
Beclin 1, autophagy related.
   
 0.918
calm3
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.596
LOC102227246
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.596
calm1
Calmodulin 1.
   
 0.596
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.596
fundc1
Uncharacterized protein.
      
 0.487
FUNDC1
FUN14 domain containing 1.
      
 0.487
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
0.422
LOC102218580
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
0.422
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.