STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrvi1Murine retrovirus integration site 1 homolog. (926 aa)    
Predicted Functional Partners:
itpr2
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.950
LOC102217419
Inositol 1,4,5-trisphosphate receptor, type 1a.
    
 0.950
itpr1
Inositol 1,4,5-trisphosphate receptor, type 1b.
    
 0.950
LOC102235247
cGMP-dependent protein kinase.
   
 0.950
cd44
CD44 molecule (Indian blood group) b.
     
 0.541
efhb
Uncharacterized protein.
      
 0.539
itpr3
Inositol 1,4,5-trisphosphate receptor, type 3.
    
 0.524
LOC102224587
cGMP-dependent protein kinase.
   
 0.521
prkg2
cGMP-dependent protein kinase.
   
 0.521
LOC102216397
cGMP-dependent protein kinase.
   
 0.521
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.