STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfyve26Zinc finger, FYVE domain containing 26. (2560 aa)    
Predicted Functional Partners:
spg11
SPG11 vesicle trafficking associated, spatacsin.
   
 
 0.782
tecpr2
Tectonin beta-propeller repeat containing 2.
   
  
 0.694
trip12
Thyroid hormone receptor interactor 12.
      
 0.667
ap5z1
Adaptor related protein complex 5 subunit zeta 1.
      
 0.654
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
      
 0.641
LOC102222479
Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
      
 0.614
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
    
 
 0.614
ttc19
Tetratricopeptide repeat domain 19.
      
 0.585
Mrnip
Uncharacterized protein.
      
 0.561
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
      
 0.487
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.