Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102221134 | LOC102226082 | ENSXMAP00000021600 | ENSXMAP00000009770 | CREB binding protein a. | E1A binding protein p300 a. | 0.992 |
LOC102221134 | LOC102230576 | ENSXMAP00000021600 | ENSXMAP00000004610 | CREB binding protein a. | CREB binding protein b. | 0.901 |
LOC102221134 | LOC102235592 | ENSXMAP00000021600 | ENSXMAP00000003713 | CREB binding protein a. | E1A binding protein p300 b. | 0.992 |
LOC102221134 | mdm2 | ENSXMAP00000021600 | ENSXMAP00000028716 | CREB binding protein a. | MDM2 proto-oncogene; Belongs to the MDM2/MDM4 family. | 0.572 |
LOC102221134 | mdm4 | ENSXMAP00000021600 | ENSXMAP00000023343 | CREB binding protein a. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.428 |
LOC102221134 | sirt1 | ENSXMAP00000021600 | ENSXMAP00000007769 | CREB binding protein a. | Sirtuin 1. | 0.613 |
LOC102221134 | tp53 | ENSXMAP00000021600 | ENSXMAP00000028829 | CREB binding protein a. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.990 |
LOC102226082 | LOC102221134 | ENSXMAP00000009770 | ENSXMAP00000021600 | E1A binding protein p300 a. | CREB binding protein a. | 0.992 |
LOC102226082 | LOC102230576 | ENSXMAP00000009770 | ENSXMAP00000004610 | E1A binding protein p300 a. | CREB binding protein b. | 0.992 |
LOC102226082 | LOC102235592 | ENSXMAP00000009770 | ENSXMAP00000003713 | E1A binding protein p300 a. | E1A binding protein p300 b. | 0.902 |
LOC102226082 | atm | ENSXMAP00000009770 | ENSXMAP00000016978 | E1A binding protein p300 a. | ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.414 |
LOC102226082 | mdm2 | ENSXMAP00000009770 | ENSXMAP00000028716 | E1A binding protein p300 a. | MDM2 proto-oncogene; Belongs to the MDM2/MDM4 family. | 0.801 |
LOC102226082 | mdm4 | ENSXMAP00000009770 | ENSXMAP00000023343 | E1A binding protein p300 a. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.428 |
LOC102226082 | sirt1 | ENSXMAP00000009770 | ENSXMAP00000007769 | E1A binding protein p300 a. | Sirtuin 1. | 0.611 |
LOC102226082 | tp53 | ENSXMAP00000009770 | ENSXMAP00000028829 | E1A binding protein p300 a. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.990 |
LOC102230576 | LOC102221134 | ENSXMAP00000004610 | ENSXMAP00000021600 | CREB binding protein b. | CREB binding protein a. | 0.901 |
LOC102230576 | LOC102226082 | ENSXMAP00000004610 | ENSXMAP00000009770 | CREB binding protein b. | E1A binding protein p300 a. | 0.992 |
LOC102230576 | LOC102235592 | ENSXMAP00000004610 | ENSXMAP00000003713 | CREB binding protein b. | E1A binding protein p300 b. | 0.992 |
LOC102230576 | mdm2 | ENSXMAP00000004610 | ENSXMAP00000028716 | CREB binding protein b. | MDM2 proto-oncogene; Belongs to the MDM2/MDM4 family. | 0.572 |
LOC102230576 | mdm4 | ENSXMAP00000004610 | ENSXMAP00000023343 | CREB binding protein b. | MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. | 0.428 |
page 1 of 4