STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmtm4CKLF-like MARVEL transmembrane domain containing 4. (208 aa)    
Predicted Functional Partners:
LOC102238058
CKLF-like MARVEL transmembrane domain containing 3.
      
 0.641
CKLF
Chemokine like factor.
      
 0.639
polr2m
RNA polymerase II subunit M.
      
 0.509
cmtm6
MARVEL domain-containing protein.
    
 
0.502
fam168b
Family with sequence similarity 168 member B.
      
 0.455
bean1
Uncharacterized protein.
      
 0.416
nhsl2
NHS-like 2.
      
 0.414
ap1ar
Adaptor related protein complex 1 associated regulatory protein.
      
 0.412
cmtm7
CKLF-like MARVEL transmembrane domain containing 7.
      
 0.405
mocs1
Molybdenum cofactor synthesis 1.
      
 0.400
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.