STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102233995Actinodin3. (302 aa)    
Predicted Functional Partners:
cdk13
Cyclin-dependent kinase 13.
    
 
 0.551
cdk12
Cyclin-dependent kinase 12.
    
 
 0.551
ENSXMAP00000037487
CARD domain-containing protein.
  
     0.440
LOC102229697
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 
 0.427
LOC102228037
Cyclin T1; Belongs to the cyclin family.
   
 
 0.427
ccnq
Cyclin Q; Belongs to the cyclin family.
   
 
 0.427
ccnt2
Cyclin T2; Belongs to the cyclin family.
   
 
 0.427
ccnk
Cyclin K; Belongs to the cyclin family.
   
 
 0.427
LOC102223614
Rapunzel 5.
  
   
 0.415
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.