Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
brix1 | ebna1bp2 | ENSXMAP00000004303 | ENSXMAP00000011374 | Brix domain containing 2. | EBNA1 binding protein 2. | 0.999 |
brix1 | gtpbp4 | ENSXMAP00000004303 | ENSXMAP00000006750 | Brix domain containing 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.994 |
brix1 | nifk | ENSXMAP00000004303 | ENSXMAP00000035062 | Brix domain containing 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.998 |
brix1 | nip7 | ENSXMAP00000004303 | ENSXMAP00000025891 | Brix domain containing 2. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.994 |
brix1 | noc2l | ENSXMAP00000004303 | ENSXMAP00000003863 | Brix domain containing 2. | NOC2-like nucleolar associated transcriptional repressor. | 0.992 |
brix1 | noc4l | ENSXMAP00000004303 | ENSXMAP00000000973 | Brix domain containing 2. | Nucleolar complex associated 4 homolog. | 0.878 |
brix1 | nop56 | ENSXMAP00000004303 | ENSXMAP00000001331 | Brix domain containing 2. | NOP56 ribonucleoprotein homolog. | 0.913 |
brix1 | nsun5 | ENSXMAP00000004303 | ENSXMAP00000019262 | Brix domain containing 2. | NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.732 |
brix1 | rpf1 | ENSXMAP00000004303 | ENSXMAP00000018013 | Brix domain containing 2. | Ribosome production factor 1 homolog. | 0.995 |
brix1 | wdr74 | ENSXMAP00000004303 | ENSXMAP00000014826 | Brix domain containing 2. | WD repeat domain 74. | 0.985 |
ebna1bp2 | brix1 | ENSXMAP00000011374 | ENSXMAP00000004303 | EBNA1 binding protein 2. | Brix domain containing 2. | 0.999 |
ebna1bp2 | gtpbp4 | ENSXMAP00000011374 | ENSXMAP00000006750 | EBNA1 binding protein 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.991 |
ebna1bp2 | nifk | ENSXMAP00000011374 | ENSXMAP00000035062 | EBNA1 binding protein 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.996 |
ebna1bp2 | nip7 | ENSXMAP00000011374 | ENSXMAP00000025891 | EBNA1 binding protein 2. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.994 |
ebna1bp2 | noc2l | ENSXMAP00000011374 | ENSXMAP00000003863 | EBNA1 binding protein 2. | NOC2-like nucleolar associated transcriptional repressor. | 0.993 |
ebna1bp2 | noc4l | ENSXMAP00000011374 | ENSXMAP00000000973 | EBNA1 binding protein 2. | Nucleolar complex associated 4 homolog. | 0.757 |
ebna1bp2 | nop56 | ENSXMAP00000011374 | ENSXMAP00000001331 | EBNA1 binding protein 2. | NOP56 ribonucleoprotein homolog. | 0.973 |
ebna1bp2 | nsun5 | ENSXMAP00000011374 | ENSXMAP00000019262 | EBNA1 binding protein 2. | NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.772 |
ebna1bp2 | rpf1 | ENSXMAP00000011374 | ENSXMAP00000018013 | EBNA1 binding protein 2. | Ribosome production factor 1 homolog. | 0.992 |
ebna1bp2 | wdr74 | ENSXMAP00000011374 | ENSXMAP00000014826 | EBNA1 binding protein 2. | WD repeat domain 74. | 0.988 |
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