STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsdmeGasdermin Eb. (461 aa)    
Predicted Functional Partners:
LOC111605766
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.597
LOC102220363
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.597
LOC102220624
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.597
LOC102229031
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.597
LOC102228435
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.569
LOC102224281
Cytochrome c, somatic b; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.569
casp2
Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
     
 0.544
casp7
Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
     
 0.523
LOC102231753
High mobility group box 1b.
     
 0.506
LOC102238067
High mobility group box 1a.
     
 0.506
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.