STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r21Protein phosphatase 1, regulatory subunit 21. (803 aa)    
Predicted Functional Partners:
rsph3
Radial spoke head 3.
    
   0.895
cryzl1
Crystallin, zeta (quinone reductase)-like 1.
    
   0.865
gatd1
Glutamine amidotransferase like class 1 domain containing 1.
    
   0.837
LOC102216585
Dystrobrevin.
    
   0.804
dtna
Dystrobrevin.
    
   0.804
dtnb
Dystrobrevin.
    
   0.804
c2h12orf4
Zgc:154077.
    
 
 0.733
tbck
TBC1 domain containing kinase.
    
 
 0.621
mrpl41
Mitochondrial ribosomal protein L41.
      
 0.613
aqp9
Aquaporin 9b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.576
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.