STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102238131Short coiled-coil protein a. (193 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.702
LOC102238370
Uncharacterized protein.
   
 
 0.666
fez2
Si:ch211-57i17.1.
   
 
 0.662
LOC102220849
Si:dkey-288i20.2.
   
 
 0.662
fez1
Fasciculation and elongation protein zeta 1 (zygin I).
   
 
 0.644
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.539
prpf38b
Uncharacterized protein.
      
 0.539
arfrp1
ADP-ribosylation factor related protein 1.
      
 0.487
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.414
LOC102231418
Uncharacterized protein.
      
 0.412
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.