STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
keap1Kelch-like ECH-associated protein 1b. (613 aa)    
Predicted Functional Partners:
LOC102232730
Si:rp71-68n21.9.
  
 
0.929
klhl13
Kelch-like family member 13.
  
 
0.927
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.922
rhobtb2
Rho related BTB domain containing 2a.
    
 0.912
LOC102221121
Cullin 3; Belongs to the cullin family.
    
 0.908
LOC102234696
Rho related BTB domain containing 4.
    
  0.908
LOC102226304
Kelch-like ECH-associated protein 1a.
  
  
 
0.903
LOC102235624
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.876
Sqstm1
Uncharacterized protein.
    
 0.835
nfe2
Nuclear factor, erythroid 2.
    
 0.815
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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