STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnnbip1Catenin, beta interacting protein 1. (81 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.999
LOC102234936
Uncharacterized protein.
    
 0.992
LOC102226016
Junction plakoglobin a.
    
 0.930
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.785
LOC102235265
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.785
LOC102238115
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.785
uckl1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.785
LOC102222150
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.785
LOC102216674
Nicotinamide riboside kinase 2.
    
 0.751
LOC102222888
ATCAY kinesin light chain interacting caytaxin b.
    
 0.751
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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