STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXMAP00000038474Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
mcrs1
Microspherule protein 1.
   
 0.911
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.853
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.852
tex30
Testis expressed 30.
    
 0.754
kansl1l
KAT8 regulatory NSL complex subunit 1-like.
    
 0.715
kansl1
KAT8 regulatory NSL complex subunit 1a.
    
 0.715
suds3
SDS3 homolog, SIN3A corepressor complex component.
   
 
 0.715
wdr5
WD repeat domain 5.
    
 0.712
Hcfc2
Host cell factor C2.
    
 0.687
hcfc1
Host cell factor C1a.
    
 0.687
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.