STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gbpAGlcNAc-binding protein A; Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin. Belongs to the GbpA family. (491 aa)    
Predicted Functional Partners:
chiA
Chitinase.
 
  
 0.887
CED71069.1
Chitodextrinase.
 
  
 0.878
CED71336.1
Chitinase.
 
  
 0.811
CED71490.1
Putative cyclic nucleotide-binding protein.
  
     0.724
CED70545.1
Putative endochitinase.
  
     0.714
chb
N,N'-diacetylchitobiase (chitobiase).
  
   
 0.656
CED70673.1
Membrane protein.
  
     0.639
CED56663.1
Putative uncharacterized protein; Lack of similarity at the N-terminus in comparison to other proteins.
  
     0.631
CED70550.1
(GlcNAc)2 ABC transporter, substrate-binding protein.
  
     0.598
CED70544.1
Glucosamine kinase.
  
     0.581
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (18%) [HD]