STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED56894.1ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (378 aa)    
Predicted Functional Partners:
CED56895.1
ABC transporter, integral membrane protein.
 
 0.998
CED56896.1
ABC transporter, integral membrane protein.
 
 0.998
malG
Maltose transport system permease protein MalG.
 
 0.991
malF
Maltose/maltodextrin transporter, permease.
 
 0.990
CED56897.1
Transporter, extracellular solute-binding protein.
 
 0.988
ugpE
Glycerol-3-phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.971
CED57520.1
Maltose/maltodextrin transporter, ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 
 0.969
CED57733.1
Putative uncharacterized protein.
 
 0.962
CED56754.1
Glycerol-3-phosphate ABC transporter, permease protein.
 
 
 0.956
CED57268.1
Extracellular solute-binding protein.
  
 0.956
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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