STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57019.1PTS system, IIA component. (261 aa)    
Predicted Functional Partners:
CED57017.1
PTS system, IIC component.
 
  
 0.989
CED57021.1
PTS system, IIBC component.
 
  
 0.980
mtlA
PTS system, mannitol-specific EIICBA component.
 
 
 0.973
CED57024.1
PTS system, fructose-like permease IIC component.
 
  
 0.969
CED57018.1
PTS system, IIB component.
 
  
 0.964
fruA
PTS system, fructose-specific IIBC component.
 
  
 0.945
CED57707.1
PTS system, sucrose-specific EIIBC component.
 
 
 0.941
ptsN
Nitrogen regulatory IIA protein, PTS system.
 
 
 0.941
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.933
ptsO
Phosphocarrier protein NPr.
  
 
 0.907
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.