STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdMType I restriction enzyme EcoEI M protein. (498 aa)    
Predicted Functional Partners:
hsdS
Type-1 restriction enzyme EcoEI specificity protein.
 
 
 0.996
CED71260.1
Type I restriction-modification system, DNA specificity domain.
 
 
 0.973
CED71263.1
Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.966
hsdR
Type I restriction enzyme EcoAI R protein.
 
 
 0.956
CED71389.1
Putative uncharacterized protein.
 
  
 0.666
CED57062.1
Putative uncharacterized protein.
  
  
 0.649
CED57032.1
Putative uncharacterized protein.
 
     0.628
CED57028.1
Putative abortive infection bacteriophage resistance protein.
 
     0.622
CED57031.1
Putative uncharacterized protein.
 
     0.613
CED72180.1
Putative type III restriction enzyme, res subunit.
 
 
 0.581
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.