STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57063.1Two component transcriptional regulator. (792 aa)    
Predicted Functional Partners:
CED71636.1
Sensor protein, GGDEF family.
 
 0.887
CED56817.1
Putative regulator, GGDEF family protein.
 
 
 0.878
CED57509.1
Sensor protein.
 
 
 0.875
CED71738.1
Putative membrane associated regulator, GGDEF family protein.
 
 
 0.875
CED70436.1
Putative membrane associated regulator, GGDEF family protein.
 
 
 0.843
CED56931.1
Putative regulator, GGDEF family protein.
 
 0.842
mshH
Putative membrane associated signaling protein, MshH.
 
 
 0.841
CED71482.1
Membrane associated GGDEF protein.
 
   0.818
CED71677.1
Membrane associated regulator, GGDEF family protein.
 
   0.817
CED70331.1
Putative regulator, GGDEF family protein.
 
 
 0.811
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.