STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57074.1NUDIX hydrolase. (175 aa)    
Predicted Functional Partners:
CED57075.1
Putative uncharacterized protein.
       0.787
CED71498.1
Membrane protein.
  
     0.639
CED56899.1
Membrane protein.
  
     0.632
CED57818.1
Glutaredoxin.
  
     0.619
CED71916.1
Putative exported protein.
 
     0.585
CED57235.1
Putative uncharacterized protein.
 
     0.582
ilvM
Acetolactate synthase small subunit.
  
     0.558
CED57071.1
Mechanosensitive ion channel.
       0.478
CED57073.1
Cytochrome c'.
       0.477
CED57924.1
Putative uncharacterized protein.
 
     0.468
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.