STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57113.1Phage replication protein. (832 aa)    
Predicted Functional Partners:
cII
Phage regulatory protein CII.
  
    0.889
CED71536.1
Phage U-like protein.
   
    0.875
CED72184.1
Resolvase.
   
  
 0.833
CED57110.1
Putative uncharacterized phage protein.
       0.783
CED57111.1
Putative uncharacterized phage protein.
       0.773
CED57112.1
Putative uncharacterized phage protein.
       0.773
CED72191.1
Putative resolvase; The CDS may be truncated at the N-terminus.
   
    0.740
CED57099.1
Putative phage integrase.
 
  
 0.623
CED57114.1
Putative uncharacterized phage protein.
       0.584
CED56721.1
Putative uncharacterized protein.
  
    0.518
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.