STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57195.1Glycosyltransferase, PMT family. (475 aa)    
Predicted Functional Partners:
CED57194.1
Glycosyltransferase, family 2.
 
  
 0.982
CED57196.1
Membrane protein.
 
  
 0.740
CED70309.1
Putative glycosyl transferase, family 2.
  
  
 0.593
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.534
gly
L-allo-threonine aldolase.
       0.531
CED70299.1
Putative sulfotransferase.
  
  
 0.530
CED70235.1
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.493
CED70298.1
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.493
CED70324.1
UDP-glucose 6-dehydrogenase.
  
  
 0.470
CED57893.1
Inner membrane protein CreD.
   
    0.452
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.