STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CED57224.1Putative exported protein. (395 aa)    
Predicted Functional Partners:
CED71916.1
Putative exported protein.
  
     0.656
ilvM
Acetolactate synthase small subunit.
  
     0.650
mog
Molybdopterin biosynthesis protein.
       0.632
CED71217.1
Putative antibiotic resistance protein.
  
     0.603
uspB
Universal stress protein B.
  
     0.551
CED70787.1
Lipoprotein.
  
   
 0.543
CED57270.1
Putative exported oxidoreductase.
  
     0.537
mtlR
Mannitol operon repressor (mannitol repressor protein).
  
     0.535
CED57222.1
Putative exported protein.
       0.520
CED57223.1
Conserved hypothetical protein.
       0.520
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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