STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57392.1Putative exported protein. (188 aa)    
Predicted Functional Partners:
cusA
Cation efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.771
CED57394.1
Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.743
CED57395.1
Putative exported protein.
 
   
 0.739
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
 
   
 0.648
copA
Copper-transporting P-type ATPase.
     
 0.627
CED71824.1
Putative preprotein translocase SecA.
  
     0.584
CED56801.1
HTH-type transcriptional regulator, TetR family.
  
     0.516
CED71470.1
ABC transporter ATP-binding protein.
  
    0.502
CED71270.1
Putative lipoprotein.
  
     0.500
CED71442.1
Putative cation-transporting ATPase.
     
 0.495
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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