STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57397.1Membrane protein. (341 aa)    
Predicted Functional Partners:
CED71694.1
Putative uncharacterized protein.
  
     0.770
CED71899.1
Putative uncharacterized protein.
  
     0.693
CED57041.1
Putative membrane protein.
  
    0.654
CED70676.1
Putative uncharacterized protein.
  
     0.640
CED70426.1
Maltose operon periplasmic protein precursor MalM.
  
     0.622
CED57198.1
Putative uncharacterized protein.
  
     0.602
CED70590.1
Membrane protein.
  
     0.589
CED56927.1
Membrane protein.
  
     0.583
CED57396.1
Putative membrane protein.
       0.543
CED57710.1
Putative ion transport.
  
     0.531
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.