CED57398.1 protein (Aliivibrio wodanis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CED57398.1

Putative uncharacterized protein. (281 aa)

Predicted Functional Partners:

CED56988.1

0.676

CED56989.1

0.656

fadE

0.583

CED57687.1

0.561

apaH

0.561

CED70703.1

0.543

CED57399.1

0.487

CED56828.1

0.486

CED70427.1

0.480

CED56785.1

0.469

Your Current Organism:

Aliivibrio wodanis

NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CED56785.1	CED57398.1	AWOD_II_0129	AWOD_II_0770	Ankyrin repeat containing protein.	Putative uncharacterized protein.	0.469
CED56785.1	apaH	AWOD_II_0129	AWOD_I_2394	Ankyrin repeat containing protein.	Bis(5'nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.	0.889
CED56828.1	CED56988.1	AWOD_II_0177	AWOD_II_0340	Peptidase, family M3.	Putative exported protein.	0.727
CED56828.1	CED56989.1	AWOD_II_0177	AWOD_II_0341	Peptidase, family M3.	TonB-dependent heme receptor.	0.592
CED56828.1	CED57398.1	AWOD_II_0177	AWOD_II_0770	Peptidase, family M3.	Putative uncharacterized protein.	0.486
CED56828.1	CED57687.1	AWOD_II_0177	AWOD_II_1068	Peptidase, family M3.	Membrane protein.	0.429
CED56828.1	CED70427.1	AWOD_II_0177	AWOD_I_0332	Peptidase, family M3.	Putative maltoporin.	0.418
CED56828.1	CED70703.1	AWOD_II_0177	AWOD_I_0609	Peptidase, family M3.	Putative uncharacterized protein.	0.613
CED56988.1	CED56828.1	AWOD_II_0340	AWOD_II_0177	Putative exported protein.	Peptidase, family M3.	0.727
CED56988.1	CED56989.1	AWOD_II_0340	AWOD_II_0341	Putative exported protein.	TonB-dependent heme receptor.	0.942
CED56988.1	CED57398.1	AWOD_II_0340	AWOD_II_0770	Putative exported protein.	Putative uncharacterized protein.	0.676
CED56988.1	CED57687.1	AWOD_II_0340	AWOD_II_1068	Putative exported protein.	Membrane protein.	0.758
CED56988.1	CED70427.1	AWOD_II_0340	AWOD_I_0332	Putative exported protein.	Putative maltoporin.	0.511
CED56988.1	CED70703.1	AWOD_II_0340	AWOD_I_0609	Putative exported protein.	Putative uncharacterized protein.	0.756
CED56989.1	CED56828.1	AWOD_II_0341	AWOD_II_0177	TonB-dependent heme receptor.	Peptidase, family M3.	0.592
CED56989.1	CED56988.1	AWOD_II_0341	AWOD_II_0340	TonB-dependent heme receptor.	Putative exported protein.	0.942
CED56989.1	CED57398.1	AWOD_II_0341	AWOD_II_0770	TonB-dependent heme receptor.	Putative uncharacterized protein.	0.656
CED56989.1	CED57687.1	AWOD_II_0341	AWOD_II_1068	TonB-dependent heme receptor.	Membrane protein.	0.704
CED56989.1	CED70427.1	AWOD_II_0341	AWOD_I_0332	TonB-dependent heme receptor.	Putative maltoporin.	0.405
CED56989.1	CED70703.1	AWOD_II_0341	AWOD_I_0609	TonB-dependent heme receptor.	Putative uncharacterized protein.	0.622

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About