STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagEPTS system permease for N-acetylglucosamine and glucose. (487 aa)    
Predicted Functional Partners:
crr
Glucose-specific phosphotransferase enzyme IIA component (PTS system).
 
 0.997
nagK
N-acetyl-d-glucosamine kinase; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.
  
 0.996
nagC
N-acetylglucosamine repressor.
  
 
 0.969
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.953
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.
  
 
 0.950
ptsH
Phosphocarrier protein Hpr, histidine-containing protein (PTS system).
  
 
 0.928
chb
N,N'-diacetylchitobiase (chitobiase).
 
  
 0.924
nagE-2
PTS permease for N-acetylglucosamine and glucose.
 
 
0.924
CED57707.1
PTS system, sucrose-specific EIIBC component.
 
 
0.911
CED70136.1
Putative beta-N-acetylhexosaminidase.
  
  
 0.910
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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