STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CED57444.1Putative exported protein. (264 aa)    
Predicted Functional Partners:
CED57445.1
ABC transporter, permease component.
 
 
 
 0.975
CED57446.1
ABC transporter, ATP-binding component.
   
 
 0.892
CED57441.1
Response regulator.
 
     0.841
CED57442.1
Two component transcriptional regulator.
 
     0.788
CED57447.1
Putative transcriptional regulator.
       0.782
CED57443.1
Putative uncharacterized protein.
       0.753
lolB
Outer-membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
    
 
 0.628
CED71186.1
Putative ABC transporter permease.
 
 
 
 0.618
CED70957.1
Predicted permease.
 
 
 
 0.601
CED71187.1
Putative ABC transporter permease.
 
 
 
 0.581
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.