Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED57505.1 | CED57803.1 | AWOD_II_0882 | AWOD_II_1188 | Fimbrial protein, Flp/Fap pilin component. | Response regulator. | 0.509 |
CED57505.1 | CED72283.1 | AWOD_II_0882 | AWOD_I_2221 | Fimbrial protein, Flp/Fap pilin component. | Putative bacterial type II secretion system protein. | 0.514 |
CED57505.1 | rcpC | AWOD_II_0882 | AWOD_II_0880 | Fimbrial protein, Flp/Fap pilin component. | Putative Flp pilus assembly protein. | 0.906 |
CED57505.1 | tadA | AWOD_II_0882 | AWOD_II_0875 | Fimbrial protein, Flp/Fap pilin component. | Type II/IV secretion system protein, ATP binding domain; Similar to Actinomycetemcomitans TadA UniProt:Q9XC06 (426 aa) fasta scores: E()=1.3e-77, 53.318% id in 422 aa. | 0.565 |
CED57505.1 | tadB | AWOD_II_0882 | AWOD_II_0874 | Fimbrial protein, Flp/Fap pilin component. | Bacterial type II secretion system protein F. | 0.503 |
CED57505.1 | tadC | AWOD_II_0882 | AWOD_II_0873 | Fimbrial protein, Flp/Fap pilin component. | Bacterial type II secretion system protein F. | 0.503 |
CED57505.1 | tadE | AWOD_II_0882 | AWOD_II_0871 | Fimbrial protein, Flp/Fap pilin component. | Membrane associated secretion system protein. | 0.563 |
CED57505.1 | tadG | AWOD_II_0882 | AWOD_II_0869 | Fimbrial protein, Flp/Fap pilin component. | Membrane associated secretion system protein. | 0.563 |
CED57803.1 | CED57505.1 | AWOD_II_1188 | AWOD_II_0882 | Response regulator. | Fimbrial protein, Flp/Fap pilin component. | 0.509 |
CED57803.1 | CED72283.1 | AWOD_II_1188 | AWOD_I_2221 | Response regulator. | Putative bacterial type II secretion system protein. | 0.766 |
CED57803.1 | rcpC | AWOD_II_1188 | AWOD_II_0880 | Response regulator. | Putative Flp pilus assembly protein. | 0.802 |
CED57803.1 | tadB | AWOD_II_1188 | AWOD_II_0874 | Response regulator. | Bacterial type II secretion system protein F. | 0.789 |
CED57803.1 | tadC | AWOD_II_1188 | AWOD_II_0873 | Response regulator. | Bacterial type II secretion system protein F. | 0.789 |
CED57803.1 | tadE | AWOD_II_1188 | AWOD_II_0871 | Response regulator. | Membrane associated secretion system protein. | 0.612 |
CED57803.1 | tadG | AWOD_II_1188 | AWOD_II_0869 | Response regulator. | Membrane associated secretion system protein. | 0.612 |
CED72283.1 | CED57505.1 | AWOD_I_2221 | AWOD_II_0882 | Putative bacterial type II secretion system protein. | Fimbrial protein, Flp/Fap pilin component. | 0.514 |
CED72283.1 | CED57803.1 | AWOD_I_2221 | AWOD_II_1188 | Putative bacterial type II secretion system protein. | Response regulator. | 0.766 |
CED72283.1 | rcpC | AWOD_I_2221 | AWOD_II_0880 | Putative bacterial type II secretion system protein. | Putative Flp pilus assembly protein. | 0.829 |
CED72283.1 | tadA | AWOD_I_2221 | AWOD_II_0875 | Putative bacterial type II secretion system protein. | Type II/IV secretion system protein, ATP binding domain; Similar to Actinomycetemcomitans TadA UniProt:Q9XC06 (426 aa) fasta scores: E()=1.3e-77, 53.318% id in 422 aa. | 0.948 |
CED72283.1 | tadB | AWOD_I_2221 | AWOD_II_0874 | Putative bacterial type II secretion system protein. | Bacterial type II secretion system protein F. | 0.980 |
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