Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED57501.1 | CED57502.1 | AWOD_II_0878 | AWOD_II_0879 | Putative lipoprotein. | Type II/III secretion system protein; Belongs to the bacterial secretin family. | 0.811 |
CED57501.1 | CED57505.1 | AWOD_II_0878 | AWOD_II_0882 | Putative lipoprotein. | Fimbrial protein, Flp/Fap pilin component. | 0.562 |
CED57501.1 | rcpC | AWOD_II_0878 | AWOD_II_0880 | Putative lipoprotein. | Putative Flp pilus assembly protein. | 0.806 |
CED57501.1 | tadV | AWOD_II_0878 | AWOD_II_0881 | Putative lipoprotein. | Type IV leader peptidase. | 0.806 |
CED57502.1 | CED57501.1 | AWOD_II_0879 | AWOD_II_0878 | Type II/III secretion system protein; Belongs to the bacterial secretin family. | Putative lipoprotein. | 0.811 |
CED57502.1 | CED57505.1 | AWOD_II_0879 | AWOD_II_0882 | Type II/III secretion system protein; Belongs to the bacterial secretin family. | Fimbrial protein, Flp/Fap pilin component. | 0.780 |
CED57502.1 | rcpC | AWOD_II_0879 | AWOD_II_0880 | Type II/III secretion system protein; Belongs to the bacterial secretin family. | Putative Flp pilus assembly protein. | 0.959 |
CED57502.1 | tadB | AWOD_II_0879 | AWOD_II_0874 | Type II/III secretion system protein; Belongs to the bacterial secretin family. | Bacterial type II secretion system protein F. | 0.910 |
CED57502.1 | tadC | AWOD_II_0879 | AWOD_II_0873 | Type II/III secretion system protein; Belongs to the bacterial secretin family. | Bacterial type II secretion system protein F. | 0.875 |
CED57502.1 | tadV | AWOD_II_0879 | AWOD_II_0881 | Type II/III secretion system protein; Belongs to the bacterial secretin family. | Type IV leader peptidase. | 0.885 |
CED57505.1 | CED57501.1 | AWOD_II_0882 | AWOD_II_0878 | Fimbrial protein, Flp/Fap pilin component. | Putative lipoprotein. | 0.562 |
CED57505.1 | CED57502.1 | AWOD_II_0882 | AWOD_II_0879 | Fimbrial protein, Flp/Fap pilin component. | Type II/III secretion system protein; Belongs to the bacterial secretin family. | 0.780 |
CED57505.1 | rcpC | AWOD_II_0882 | AWOD_II_0880 | Fimbrial protein, Flp/Fap pilin component. | Putative Flp pilus assembly protein. | 0.906 |
CED57505.1 | tadB | AWOD_II_0882 | AWOD_II_0874 | Fimbrial protein, Flp/Fap pilin component. | Bacterial type II secretion system protein F. | 0.503 |
CED57505.1 | tadC | AWOD_II_0882 | AWOD_II_0873 | Fimbrial protein, Flp/Fap pilin component. | Bacterial type II secretion system protein F. | 0.503 |
CED57505.1 | tadV | AWOD_II_0882 | AWOD_II_0881 | Fimbrial protein, Flp/Fap pilin component. | Type IV leader peptidase. | 0.836 |
rcpC | CED57501.1 | AWOD_II_0880 | AWOD_II_0878 | Putative Flp pilus assembly protein. | Putative lipoprotein. | 0.806 |
rcpC | CED57502.1 | AWOD_II_0880 | AWOD_II_0879 | Putative Flp pilus assembly protein. | Type II/III secretion system protein; Belongs to the bacterial secretin family. | 0.959 |
rcpC | CED57505.1 | AWOD_II_0880 | AWOD_II_0882 | Putative Flp pilus assembly protein. | Fimbrial protein, Flp/Fap pilin component. | 0.906 |
rcpC | tadB | AWOD_II_0880 | AWOD_II_0874 | Putative Flp pilus assembly protein. | Bacterial type II secretion system protein F. | 0.757 |
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