Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED56899.1 | CED57557.1 | AWOD_II_0250 | AWOD_II_0936 | Membrane protein. | Putative glutaredoxin. | 0.483 |
CED57556.1 | CED57557.1 | AWOD_II_0935 | AWOD_II_0936 | Hypothetical protein. | Putative glutaredoxin. | 0.415 |
CED57557.1 | CED56899.1 | AWOD_II_0936 | AWOD_II_0250 | Putative glutaredoxin. | Membrane protein. | 0.483 |
CED57557.1 | CED57556.1 | AWOD_II_0936 | AWOD_II_0935 | Putative glutaredoxin. | Hypothetical protein. | 0.415 |
CED57557.1 | CED71723.1 | AWOD_II_0936 | AWOD_I_1653 | Putative glutaredoxin. | Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.711 |
CED57557.1 | CED71724.1 | AWOD_II_0936 | AWOD_I_1654 | Putative glutaredoxin. | Putative uncharacterized protein. | 0.711 |
CED57557.1 | msrA | AWOD_II_0936 | AWOD_I_2340 | Putative glutaredoxin. | Peptide methionine sulfoxide reductase MSRA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.458 |
CED57557.1 | msrB-2 | AWOD_II_0936 | AWOD_II_0014 | Putative glutaredoxin. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.578 |
CED57557.1 | nfuA | AWOD_II_0936 | AWOD_I_2544 | Putative glutaredoxin. | Fe/S biogenesis protein nfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.544 |
CED57557.1 | nrdA | AWOD_II_0936 | AWOD_I_1517 | Putative glutaredoxin. | Ribonucleoside-diphosphate reductase 1 alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.711 |
CED57557.1 | putP | AWOD_II_0936 | AWOD_II_0937 | Putative glutaredoxin. | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.405 |
CED57557.1 | secB | AWOD_II_0936 | AWOD_I_0252 | Putative glutaredoxin. | Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.481 |
CED71723.1 | CED57557.1 | AWOD_I_1653 | AWOD_II_0936 | Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Putative glutaredoxin. | 0.711 |
CED71723.1 | CED71724.1 | AWOD_I_1653 | AWOD_I_1654 | Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Putative uncharacterized protein. | 0.989 |
CED71723.1 | nrdA | AWOD_I_1653 | AWOD_I_1517 | Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Ribonucleoside-diphosphate reductase 1 alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.900 |
CED71724.1 | CED57557.1 | AWOD_I_1654 | AWOD_II_0936 | Putative uncharacterized protein. | Putative glutaredoxin. | 0.711 |
CED71724.1 | CED71723.1 | AWOD_I_1654 | AWOD_I_1653 | Putative uncharacterized protein. | Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.989 |
msrA | CED57557.1 | AWOD_I_2340 | AWOD_II_0936 | Peptide methionine sulfoxide reductase MSRA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Putative glutaredoxin. | 0.458 |
msrA | msrB-2 | AWOD_I_2340 | AWOD_II_0014 | Peptide methionine sulfoxide reductase MSRA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.705 |
msrB-2 | CED57557.1 | AWOD_II_0014 | AWOD_II_0936 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Putative glutaredoxin. | 0.578 |
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