STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57562.1Putative exported protein. (624 aa)    
Predicted Functional Partners:
vasL-2
Serine/threonine phosphoprotein phosphatase.
 
  
 0.757
CED72114.1
Putative amidotransferase.
  
  
 0.532
CED57563.1
Membrane protein.
       0.524
CED57564.1
Putative aldo-keto reductase.
       0.511
CED71071.1
Serine/threonine protein kinase.
 
  
 0.501
CED57446.1
ABC transporter, ATP-binding component.
  
    0.431
CED71188.1
ABC transporter ATP-binding protein.
  
    0.431
CED71239.1
ABC transporter, ATP-binding protein.
  
    0.431
CED71745.1
Putative uncharacterized protein; No significant database matches.
  
     0.425
CED71746.1
Putative exported protein.
  
     0.415
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.