STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57572.1Methyl-accepting chemotaxis protein, CheC-like family. (153 aa)    
Predicted Functional Partners:
cheY
Chemotaxis protein CheY.
 
 
  0.952
CED72430.1
Putative chemotactic response regulator, CheC.
  
  
 
0.903
CED56718.1
Methyl-accepting chemotaxis protein, CheC-like family.
  
  
 
0.901
CED71138.1
Putative two-component response regulator.
     
  0.900
CED57261.1
Putative response regulator.
 
 
 0.659
CED71313.1
Putative uncharacterized protein.
  
     0.623
CED57043.1
Putative uncharacterized protein; Lack of similarity at the C-terminus in comparison to other proteins.
  
     0.622
CED57171.1
Putative uncharacterized protein.
  
     0.604
CED71652.1
Putative membrane protein.
  
   
 0.602
CED57095.1
Putative chemotaxis protein, CheW-like.
 
 
 
 0.595
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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