Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED56957.1 | CED57064.1 | AWOD_II_0309 | AWOD_II_0419 | 5'-nucleotidase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.913 |
CED56957.1 | CED57612.1 | AWOD_II_0309 | AWOD_II_0993 | 5'-nucleotidase. | Putative cytidine and deoxycytidylate deaminase. | 0.910 |
CED56957.1 | CED71050.1 | AWOD_II_0309 | AWOD_I_0957 | 5'-nucleotidase. | 5'-nucleotidase. | 0.900 |
CED56957.1 | cmk | AWOD_II_0309 | AWOD_I_1884 | 5'-nucleotidase. | Cytidylate kinase. | 0.900 |
CED56957.1 | nutA | AWOD_II_0309 | AWOD_II_1242 | 5'-nucleotidase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.902 |
CED56957.1 | nutA-2 | AWOD_II_0309 | AWOD_I_0748 | 5'-nucleotidase. | 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | 0.914 |
CED56957.1 | surE | AWOD_II_0309 | AWOD_I_2150 | 5'-nucleotidase. | Multifunctional protein SurE (stationary-phase survival protein SurE); Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.909 |
CED56957.1 | tdk | AWOD_II_0309 | AWOD_I_1704 | 5'-nucleotidase. | Thymidine kinase. | 0.918 |
CED56957.1 | thyA | AWOD_II_0309 | AWOD_I_2225 | 5'-nucleotidase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.907 |
CED56957.1 | tmk | AWOD_II_0309 | AWOD_I_1858 | 5'-nucleotidase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.904 |
CED57064.1 | CED56957.1 | AWOD_II_0419 | AWOD_II_0309 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase. | 0.913 |
CED57064.1 | CED57612.1 | AWOD_II_0419 | AWOD_II_0993 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Putative cytidine and deoxycytidylate deaminase. | 0.901 |
CED57064.1 | CED71050.1 | AWOD_II_0419 | AWOD_I_0957 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase. | 0.900 |
CED57064.1 | cmk | AWOD_II_0419 | AWOD_I_1884 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidylate kinase. | 0.900 |
CED57064.1 | nutA | AWOD_II_0419 | AWOD_II_1242 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.929 |
CED57064.1 | nutA-2 | AWOD_II_0419 | AWOD_I_0748 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | 0.928 |
CED57064.1 | surE | AWOD_II_0419 | AWOD_I_2150 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Multifunctional protein SurE (stationary-phase survival protein SurE); Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.909 |
CED57064.1 | tdk | AWOD_II_0419 | AWOD_I_1704 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase. | 0.902 |
CED57064.1 | thyA | AWOD_II_0419 | AWOD_I_2225 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.904 |
CED57064.1 | tmk | AWOD_II_0419 | AWOD_I_1858 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.912 |
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