STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57692.1Putative exported protein. (105 aa)    
Predicted Functional Partners:
CED57687.1
Membrane protein.
 
    0.981
CED57690.1
ABC transporter, periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
    0.961
CED57691.1
Putative membrane protein.
  
    0.959
CED57689.1
ABC transporter, ATP binding protein.
 
    0.926
CED57688.1
ABC-3 transporter protein, membrane component.
 
    0.920
CED57693.1
Putative membrane protein.
 
     0.902
CED57694.1
Putative exported protein.
 
     0.864
CED57695.1
Membrane protein.
 
     0.833
CED71611.1
Periplasmic solute binding protein.
 
    0.715
CED57696.1
Putative exported protein.
 
     0.640
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.