STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57775.1Putative iron ABC transporter, membrane component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (346 aa)    
Predicted Functional Partners:
CED57774.1
Putative iron ABC transporter, ATP-binding protein.
 
 
 0.986
CED57776.1
Putative iron ABC transporter, plasmic binding protein.
 
 
 0.972
pvuE
Ferric vibrioferrin transport ATP-binding protein PvuE.
 
 
 0.953
hutD
Heme transporter protein HuvD, ATP-binding component.
 
 
 0.950
huvB
Heme transporter protein HuvB, putative periplasmic binding protein.
 
 
 0.892
CED57545.1
Ferric siderophore transport protein, ATP-binding component.
  
  
 0.725
pvuB
Ferric vibrioferrin-binding periplasmic protein PvuB.
 
  
 0.589
CED56812.1
TonB-dependent outer membrane receptor.
 
  
 0.519
CED57226.1
TonB-dependent receptor.
 
  
 0.484
CED57773.1
Putative exported hemolysin.
       0.452
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.