STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED57776.1Putative iron ABC transporter, plasmic binding protein. (305 aa)    
Predicted Functional Partners:
CED57774.1
Putative iron ABC transporter, ATP-binding protein.
 
 
 0.992
CED57775.1
Putative iron ABC transporter, membrane component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.991
pvuE
Ferric vibrioferrin transport ATP-binding protein PvuE.
 
 
 0.953
huvC
Heme transporter protein HuvC, transmembrane permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.949
pvuD
Ferric vibrioferrin transport system permease protein PvuD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.947
pvuC
Ferric vibrioferrin transport system permease protein PvuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.945
huvZ
Heme uptake and utilization protein HuvZ.
  
    0.716
huvB
Heme transporter protein HuvB, putative periplasmic binding protein.
  
  
 0.576
hisI
Histidine biosynthesis bifunctional protein HisIE [includes: phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase]; In the N-terminal section; belongs to the PRA-CH family.
   
   0.567
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.554
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.