Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CED57822.1 | CED57823.1 | AWOD_II_1208 | AWOD_II_1209 | Predicted permease. | ABC transporter, ATP-binding protein. | 0.900 |
| CED57822.1 | CED57830.1 | AWOD_II_1208 | AWOD_II_1216 | Predicted permease. | Arylesterase. | 0.811 |
| CED57823.1 | CED57822.1 | AWOD_II_1209 | AWOD_II_1208 | ABC transporter, ATP-binding protein. | Predicted permease. | 0.900 |
| CED57823.1 | CED57830.1 | AWOD_II_1209 | AWOD_II_1216 | ABC transporter, ATP-binding protein. | Arylesterase. | 0.579 |
| CED57823.1 | CED71237.1 | AWOD_II_1209 | AWOD_I_1152 | ABC transporter, ATP-binding protein. | ABC transporter, permease protein. | 0.480 |
| CED57823.1 | dnaG | AWOD_II_1209 | AWOD_I_0348 | ABC transporter, ATP-binding protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.429 |
| CED57823.1 | gcp | AWOD_II_1209 | AWOD_I_0351 | ABC transporter, ATP-binding protein. | O-sialoglycoprotein endopeptidase (glycoprotease); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.502 |
| CED57823.1 | pheS | AWOD_II_1209 | AWOD_I_1432 | ABC transporter, ATP-binding protein. | phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.512 |
| CED57823.1 | rpsE | AWOD_II_1209 | AWOD_I_2423 | ABC transporter, ATP-binding protein. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.474 |
| CED57823.1 | rpsK | AWOD_II_1209 | AWOD_I_2418 | ABC transporter, ATP-binding protein. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.415 |
| CED57823.1 | sapD | AWOD_II_1209 | AWOD_II_0318 | ABC transporter, ATP-binding protein. | Peptide transport system ATP-binding protein SapD; Belongs to the ABC transporter superfamily. | 0.497 |
| CED57830.1 | CED57822.1 | AWOD_II_1216 | AWOD_II_1208 | Arylesterase. | Predicted permease. | 0.811 |
| CED57830.1 | CED57823.1 | AWOD_II_1216 | AWOD_II_1209 | Arylesterase. | ABC transporter, ATP-binding protein. | 0.579 |
| CED71237.1 | CED57823.1 | AWOD_I_1152 | AWOD_II_1209 | ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.480 |
| dnaG | CED57823.1 | AWOD_I_0348 | AWOD_II_1209 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | ABC transporter, ATP-binding protein. | 0.429 |
| dnaG | gcp | AWOD_I_0348 | AWOD_I_0351 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | O-sialoglycoprotein endopeptidase (glycoprotease); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.709 |
| dnaG | pheS | AWOD_I_0348 | AWOD_I_1432 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.556 |
| dnaG | rpsK | AWOD_I_0348 | AWOD_I_2418 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.410 |
| gcp | CED57823.1 | AWOD_I_0351 | AWOD_II_1209 | O-sialoglycoprotein endopeptidase (glycoprotease); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | ABC transporter, ATP-binding protein. | 0.502 |
| gcp | dnaG | AWOD_I_0351 | AWOD_I_0348 | O-sialoglycoprotein endopeptidase (glycoprotease); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.709 |
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