Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
malSAlpha-amylase. (554 aa)    
Predicted Functional Partners:
pulA
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.965
nplT
Neopullulanase; Belongs to the glycosyl hydrolase 13 family.
  
  
  0.962
CED57522.1
Putative alpha amylase; Similar to Sulfolobus acidocaldarius Glycogen debranching enzyme (Amylase) TreX UniProt:O05152 (713 aa) fasta scores: E()=3.7e-85, 38.576% id in 674 aa; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.943
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.943
malQ
4-alpha-glucanotransferase.
 
 
 0.939
malP
Phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.937
CED57440.1
Glycosyl hydrolase.
  
  
  0.934
amyS
Alpha-amylase.
 
  
  0.930
CED71205.1
Alpha-amylase.
  
  
 0.919
CED57520.1
Maltose/maltodextrin transporter, ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 
  
 0.800
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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