STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED70127.16-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (462 aa)    
Predicted Functional Partners:
CED57708.1
Glycosyl hydrolase, Family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.958
crr
Glucose-specific phosphotransferase enzyme IIA component (PTS system).
 
 
 0.936
CED57707.1
PTS system, sucrose-specific EIIBC component.
 
  
 0.930
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.913
pgm
Phosphoglucomutase.
    
 0.901
yeaD
Putative aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
     
 0.900
CED71730.1
Putative lipoprotein.
  
  
 0.785
treB
PTS system, trehalose-specific EIIBC component.
 
  
 0.758
CED57021.1
PTS system, IIBC component.
 
   
 0.631
CED57017.1
PTS system, IIC component.
 
   
 0.624
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.